CDC-Authored Genomics and Precision Health Publications Database
Last data update: Apr 29, 2024. (Total: 5888 publications)
Query Trace: Holt J[original query] |
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Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Njamkepo E , Fawal N , Tran-Dien A , Hawkey J , Strockbine N , Jenkins C , Talukder KA , Bercion R , Kuleshov K , Kolínská R , Russell JE , Kaftyreva L , Accou-Demartin M , Karas A , Vandenberg O , Mather AE , Mason CJ , Page AJ , Ramamurthy T , Bizet C , Gamian A , Carle I , Sow AG , Bouchier C , Wester AL , Lejay-Collin M , Fonkoua MC , Le Hello S , Blaser MJ , Jernberg C , Ruckly C , Mérens A , Page AL , Aslett M , Roggentin P , Fruth A , Denamur E , Venkatesan M , Bercovier H , Bodhidatta L , Chiou CS , Clermont D , Colonna B , Egorova S , Pazhani GP , Ezernitchi AV , Guigon G , Harris SR , Izumiya H , Korzeniowska-Kowal A , Lutyńska A , Gouali M , Grimont F , Langendorf C , Marejková M , Peterson LA , Perez-Perez G , Ngandjio A , Podkolzin A , Souche E , Makarova M , Shipulin GA , Ye C , Žemličková H , Herpay M , Grimont PA , Parkhill J , Sansonetti P , Holt KE , Brisse S , Thomson NR , Weill FX . Nat Microbiol 2016 1 16027 |
Evidence review and recommendations for the implementation of genomics for antimicrobial resistance surveillance: reports from an international expert group
Baker KS , Jauneikaite E , Nunn JG , Midega JT , Atun R , Holt KE , Walia K , Howden BP , Tate H , Okeke IN , Carattoli A , Hsu LY , Hopkins KL , Muloi DM , Wheeler NE , Aanensen DM , Mason LCE , Rodgus J , Hendriksen RS , Essack SY , Egyir B , Halpin AL , MacCannell DR , Campos J , Srikantiah P , Feasey NA , Peacock SJ . Lancet Microbe 2023 4 (12) e1035-e1039 |
Genomics for antimicrobial resistance surveillance to support infection prevention and control in health-care facilities
Jauneikaite E , Baker KS , Nunn JG , Midega JT , Hsu LY , Singh SR , Halpin AL , Hopkins KL , Price JR , Srikantiah P , Egyir B , Okeke IN , Holt KE , Peacock SJ , Feasey NA . Lancet Microbe 2023 4 (12) e1040-e1046 |
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes
Carey ME , Dyson ZA , Ingle DJ , Amir A , Aworh MK , Chattaway MA , Chew KL , Crump JA , Feasey NA , Howden BP , Keddy KH , Maes M , Parry CM , Van Puyvelde S , Webb HE , Afolayan AO , Alexander AP , Anandan S , Andrews JR , Ashton PM , Basnyat B , Bavdekar A , Bogoch II , Clemens JD , da Silva KE , De A , de Ligt J , Diaz Guevara PL , Dolecek C , Dutta S , Ehlers MM , Francois Watkins L , Garrett DO , Godbole G , Gordon MA , Greenhill AR , Griffin C , Gupta M , Hendriksen RS , Heyderman RS , Hooda Y , Hormazabal JC , Ikhimiukor OO , Iqbal J , Jacob JJ , Jenkins C , Jinka DR , John J , Kang G , Kanteh A , Kapil A , Karkey A , Kariuki S , Kingsley RA , Koshy RM , Lauer AC , Levine MM , Lingegowda RK , Luby SP , Mackenzie GA , Mashe T , Msefula C , Mutreja A , Nagaraj G , Nagaraj S , Nair S , Naseri TK , Nimarota-Brown S , Njamkepo E , Okeke IN , Perumal SPB , Pollard AJ , Pragasam AK , Qadri F , Qamar FN , Rahman SIA , Rambocus SD , Rasko DA , Ray P , Robins-Browne R , Rongsen-Chandola T , Rutanga JP , Saha SK , Saha S , Saigal K , Sajib MSI , Seidman JC , Shakya J , Shamanna V , Shastri J , Shrestha R , Sia S , Sikorski MJ , Singh A , Smith AM , Tagg KA , Tamrakar D , Tanmoy AM , Thomas M , Thomas MS , Thomsen R , Thomson NR , Tupua S , Vaidya K , Valcanis M , Veeraraghavan B , Weill FX , Wright J , Dougan G , Argimón S , Keane JA , Aanensen DM , Baker S , Holt KE . Elife 2023 12 |
Trends in the use of cervical cancer screening tests in a large medical claims database, United States, 2013-2019.
Qin J , Shahangian S , Saraiya M , Holt H , Gagnon M , Sawaya GF . Gynecol Oncol 2021 163 (2) 378-384 |
The impact of genomics on precision public health: beyond the pandemic.
Khoury MJ , Holt KE . Genome Med 2021 13 (1) 67 |
Reactive astrocyte nomenclature, definitions, and future directions.
Escartin C , Galea E , Lakatos A , O'Callaghan JP , Petzold GC , Serrano-Pozo A , Steinhäuser C , Volterra A , Carmignoto G , Agarwal A , Allen NJ , Araque A , Barbeito L , Barzilai A , Bergles DE , Bonvento G , Butt AM , Chen WT , Cohen-Salmon M , Cunningham C , Deneen B , De Strooper B , Díaz-Castro B , Farina C , Freeman M , Gallo V , Goldman JE , Goldman SA , Götz M , Gutiérrez A , Haydon PG , Heiland DH , Hol EM , Holt MG , Iino M , Kastanenka KV , Kettenmann H , Khakh BS , Koizumi S , Lee CJ , Liddelow SA , MacVicar BA , Magistretti P , Messing A , Mishra A , Molofsky AV , Murai KK , Norris CM , Okada S , Oliet SHR , Oliveira JF , Panatier A , Parpura V , Pekna M , Pekny M , Pellerin L , Perea G , Pérez-Nievas BG , Pfrieger FW , Poskanzer KE , Quintana FJ , Ransohoff RM , Riquelme-Perez M , Robel S , Rose CR , Rothstein JD , Rouach N , Rowitch DH , Semyanov A , Sirko S , Sontheimer H , Swanson RA , Vitorica J , Wanner IB , Wood LB , Wu J , Zheng B , Zimmer ER , Zorec R , Sofroniew MV , Verkhratsky A . Nat Neurosci 2021 24 (3) 312-325 |
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.
Park SE , Pham DT , Boinett C , Wong VK , Pak GD , Panzner U , Espinoza LMC , von Kalckreuth V , Im J , Schutt-Gerowitt H , Crump JA , Breiman RF , Adu-Sarkodie Y , Owusu-Dabo E , Rakotozandrindrainy R , Soura AB , Aseffa A , Gasmelseed N , Keddy KH , May J , Sow AG , Aaby P , Biggs HM , Hertz JT , Montgomery JM , Cosmas L , Fields B , Sarpong N , Razafindrabe TJL , Raminosoa TM , Kabore LP , Sampo E , Teferi M , Yeshitela B , El Tayeb MA , Sooka A , Meyer CG , Krumkamp R , Dekker DM , Jaeger A , Poppert S , Tall A , Niang A , Bjerregaard-Andersen M , Valborg Løfberg S , Seo HJ , Jeon HJ , Deerin JF , Park J , Konings F , Ali M , Clemens JD , Hughes P , Sendagala JN , Vudriko T , Downing R , Ikumapayi UN , Mackenzie GA , Obaro S , Argimon S , Aanensen DM , Page A , Keane JA , Duchene S , Dyson Z , Holt KE , Dougan G , Marks F , Baker S . Nat Commun 2018 9 (1) 5094 |
Multilevel Regression for Small-Area Estimation of Mammography Use in the United States, 2014.
Berkowitz Z , Zhang X , Richards TB , Sabatino SA , Peipins LA , Holt J , White MC . Cancer Epidemiol Biomarkers Prev 2018 28 (1) 32-40 |
Protracted Outbreak of Salmonella Newport Infections Linked to Ground Beef: Possible Role of Dairy Cows - 21 States, 2016-2017.
Marshall KEH , Tewell M , Tecle S , Leeper M , Sinatra J , Kissler B , Fung A , Brown K , Wagner D , Trees E , Hise KB , Chaturvedi V , Schlater LK , Morningstar-Shaw BR , Whitlock L , Holt K , Becker K , Nichols M , Williams IT , Jhung M , Wise ME , Gieraltowski L . MMWR Morb Mortal Wkly Rep 2018 67 (15) 443-446 |
Multilevel Small-Area Estimation of Colorectal Cancer Screening in the United States.
Berkowitz Z , Zhang X , Richards TB , Nadel M , Peipins LA , Holt J . Cancer Epidemiol Biomarkers Prev 2018 27 (3) 245-253 |
Genomic history of the seventh pandemic of cholera in Africa.
Weill FX , Domman D , Njamkepo E , Tarr C , Rauzier J , Fawal N , Keddy KH , Salje H , Moore S , Mukhopadhyay AK , Bercion R , Luquero FJ , Ngandjio A , Dosso M , Monakhova E , Garin B , Bouchier C , Pazzani C , Mutreja A , Grunow R , Sidikou F , Bonte L , Breurec S , Damian M , Njanpop-Lafourcade BM , Sapriel G , Page AL , Hamze M , Henkens M , Chowdhury G , Mengel M , Koeck JL , Fournier JM , Dougan G , Grimont PAD , Parkhill J , Holt KE , Piarroux R , Ramamurthy T , Quilici ML , Thomson NR . Science 2017 358 (6364) 785-789 |
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.
Perrin A , Larsonneur E , Nicholson AC , Edwards DJ , Gundlach KM , Whitney AM , Gulvik CA , Bell ME , Rendueles O , Cury J , Hugon P , Clermont D , Enouf V , Loparev V , Juieng P , Monson T , Warshauer D , Elbadawi LI , Walters MS , Crist MB , Noble-Wang J , Borlaug G , Rocha EPC , Criscuolo A , Touchon M , Davis JP , Holt KE , McQuiston JR , Brisse S . Nat Commun 2017 8 15483 |
Incidence and Trends of Infections with Pathogens Transmitted Commonly Through Food and the Effect of Increasing Use of Culture-Independent Diagnostic Tests on Surveillance - Foodborne Diseases Active Surveillance Network, 10 U.S. Sites, 2013-2016.
Marder EP , Cieslak PR , Cronquist AB , Dunn J , Lathrop S , Rabatsky-Ehr T , Ryan P , Smith K , Tobin-D'Angelo M , Vugia DJ , Zansky S , Holt KG , Wolpert BJ , Lynch M , Tauxe R , Geissler AL . MMWR Morb Mortal Wkly Rep 2017 66 (15) 397-403 |
Utility of Combining Whole Genome Sequencing with Traditional Investigational Methods To Solve Foodborne Outbreaks of Salmonella Infections Associated with Chicken: A New Tool for Tackling This Challenging Food Vehicle.
Crowe SJ , Green A , Hernandez K , Peralta V , Bottichio L , Defibaugh-Chavez S , Douris A , Gieraltowski L , Hise K , La-Pham K , Neil KP , Simmons M , Tillman G , Tolar B , Wagner D , Wasilenko J , Holt K , Trees E , Wise ME . J Food Prot 2017 80 (4) 654-660 |
Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa.
Wong VK , Holt KE , Okoro C , Baker S , Pickard DJ , Marks F , Page AJ , Olanipekun G , Munir H , Alter R , Fey PD , Feasey NA , Weill FX , Le Hello S , Hart PJ , Kariuki S , Breiman RF , Gordon MA , Heyderman RS , Jacobs J , Lunguya O , Msefula C , MacLennan CA , Keddy KH , Smith AM , Onsare RS , De Pinna E , Nair S , Amos B , Dougan G , Obaro S . PLoS Negl Trop Dis 2016 10 (9) e0004781 |
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events.
Wong VK , Baker S , Pickard DJ , Parkhill J , Page AJ , Feasey NA , Kingsley RA , Thomson NR , Keane JA , Weill FX , Edwards DJ , Hawkey J , Harris SR , Mather AE , Cain AK , Hadfield J , Hart PJ , Thieu NT , Klemm EJ , Glinos DA , Breiman RF , Watson CH , Kariuki S , Gordon MA , Heyderman RS , Okoro C , Jacobs J , Lunguya O , Edmunds WJ , Msefula C , Chabalgoity JA , Kama M , Jenkins K , Dutta S , Marks F , Campos J , Thompson C , Obaro S , MacLennan CA , Dolecek C , Keddy KH , Smith AM , Parry CM , Karkey A , Mulholland EK , Campbell JI , Dongol S , Basnyat B , Dufour M , Bandaranayake D , Naseri TT , Singh SP , Hatta M , Newton P , Onsare RS , Isaia L , Dance D , Davong V , Thwaites G , Wijedoru L , Crump JA , De Pinna E , Nair S , Nilles EJ , Thanh DP , Turner P , Soeng S , Valcanis M , Powling J , Dimovski K , Hogg G , Farrar J , Holt KE , Dougan G . Nat Genet 2015 47 (6) 632-9 |
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- Page last updated:Apr 29, 2024
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